Detailed information on CNT30678058


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691157Setaria viridisOryza sativa24.818.3589.2365forward
CNT30106366Setaria viridisOryza longistaminata29.3924.8490.9177forward

Expression of CNT30678058

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLRLRARKRAALDAIGDPKQLSQYAAAAASV*

>peptide 2 (69 aa)
TLARRQICHVLTRAFALGFYDVRTHEHAWSLGALEARGDALAAEVEDEAEVDGDVEVEGKEEGRLGRHW*

Sequence

>CNT30678058
ACGTTGGCACGCAGACAAATTTGTCACGTGCTAACGCGTGCTTTTGCACTTGGATTCTACGACGTGCGCACGCATGAGCATGCATGGTCGTTAGGCGCAC
TTGAAGCCCGTGGGGACGCCCTTGCCGCAGAAGTTGAGGACGAGGCTGAGGTTGACGGGGATGTTGAGGTTGAGGGCAAGGAAGAGGGCCGCCTTGGACG
CCATTGGTGACCCCAAGCAGCTAAGCCAATACGCGGCGGCGGCTGCAAGTGTGTGAGTCTCC