Detailed information on CNT30677946


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000582, E-value = 2e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508435Setaria viridisSolanum lycopersicum53.456.4583.87124reverse complement

Expression of CNT30677946

Peptides detected in this lncRNA

>peptide 1 (32 aa)
KEGRFQRRKAMGRESVCDPWISDRETVSKLRG*

>peptide 2 (44 aa)
RKDAFRGERPWGERASVIHGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT30677946
GAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGAGAGCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAG
TCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGAAAAATCAACCGAGACCCCGTTACAAGCAGCAAGCGTAGG
CTGTGTTGCTGTAGCGCGCCCTACGGAGTTGT