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Detailed information on CNT30677910


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103844Setaria viridisOryza rufipogon71.487.4788.89342forward

Expression of CNT30677910

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MRSNLWSMRENTSTTLVELEIMHTARCTLARAPSWSGTRSHPRSEHHRTSGRQSEMR*

>peptide 2 (46 aa)
CCKRHTTTDNSSNRHTDTQQDKIGATRADHRITAAHRPDTAAGSIV*

Sequence

>CNT30677910
ATGTTGTAAACGACATACGACGACAGATAACAGTTCAAACCGACACACCGACACACAACAAGATAAGATAGGAGCCACTCGGGCAGATCATAGGATAACC
GCGGCACACAGGCCTGACACAGCAGCAGGAAGCATCGTCTAGTACTCGTCACCCTCGTCTCCTTCCTCGCCCTCGTCGAACTCAGCGCCGACCTCCTCGT
AGTCCTTCTCGAGCGCAGCCAGGTCCTCACGGGCCTCAGAGAACTCGCCCTCCTCCATGCCCTCACCCACGTACCAGTGAACGAAGGCACGCTTGGCGTA
CATGAGGTCAAACTTGTGGTCGATGCGGGAGAACACCTCGACCACGCTGGTGGAGTTGGAGATCATGCACACGGCACGCTGCACCTTGGCCAGGGCACCA
AGTTGGTCTGGAACTCGTTCACATCCACGTTCAGAGCACCATCGAACCTCAGGGAGGCAATCAGAGATGAGATGACCTG