Detailed information on CNT30677870


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691897Setaria viridisOryza sativa31.2310.7291.1479forward
CNT30346084Setaria viridisEragrostis tef20.9514.7696.2353reverse complement
CNT30100908Setaria viridisOryza rufipogon31.2311.591.1479forward
CNT30575942Setaria viridisOryza barthii31.2311.5891.1479forward

Expression of CNT30677870

Peptides detected in this lncRNA

>peptide 1 (82 aa)
SLKCMAPSFQTRNAVPNMMVVMSVKDTRTRKTRGGGRFLRRGRRRLVVVSGSAVTLGGEELRLVAAIFLSSTRPQHFVLRPVK

>peptide 2 (83 aa)
LVEVYGAELPDEECGAEHDGGDEREGHEDEEDERGWPLLAPRPAPLGRCQWLGSNPGRGGAEAGGSHLPLLHSATAFCAKASED

Sequence

>CNT30677870
ACTCGTTGAAGTGTATGGCGCCGAGCTTCCAGACGAGGAATGCGGTGCCGAACATGATGGTGGTGATGAGCGTGAAGGACACGAGGACGAGGAAGACGAG
AGGGGGTGGCCGCTTCTTGCGCCGCGGCCGGCGCCGCTTGGTCGTTGTCAGTGGCTCGGCAGTAACCCTGGGCGGGGAGGAGCTGAGGCTGGTGGCAGCC
ATCTTCCTCTCCTCCACTCGGCCACAGCATTTTGTGCTAAGGCCAGTGAAGAT