Detailed information on CNT30677785


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRR5|TBA3_HORVU, E-value = 4e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504800Setaria viridisNicotiana attenuata50.1635.5285.99157forward
CNT30369826Setaria viridisOryza glumipatula87.2253.3287.18273forward

Expression of CNT30677785

Peptides detected in this lncRNA

>peptide 1 (66 aa)
PRHTGLTQQQEASSSTRHPRLLPRPRRTQRRPPRSPSRAQPGAVGDLCNRQLLMVGLLGRDDWCIG*

Sequence

>CNT30677785
ACCGCGGCACACAGGCCTGACACAGCAGCAGGAAGCATCGTCTAGTACTCGTCACCCTCGTCTCCTTCCTCGCCCTCGTCGAACTCAGCGCCGACCTCCT
CGTAGTCCTTCTCGAGCGCAGCCAGGCGCTGTTGGTGATCTCTGCAACAGACAGCTGCTCATGGTAGGCCTTCTCGGCAGAGATGACTGGTGCATAGGAT
GAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAACTCGTTCACATCCACGTTCAGAGCACCATCGAACCTCAGGGAGGCAATCAGAG
ATGAGATGACCTG