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Detailed information on CNT30677540


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521984Setaria viridisSetaria italica26.2427.18100106forward
CNT30103537Setaria viridisOryza rufipogon18.3224.6791.8974forward

Expression of CNT30677540

Peptides detected in this lncRNA

>peptide 1 (91 aa)
KTIYKTHIDMQGHNGQLTSSTHSKKVGEVVLPNIFLQNKLARKIKFPYEPELFSHESRAEPCMPNPDIRLNSVLKSSRQCSWSRFLLQNLP*

Sequence

>CNT30677540
AAAGACAATATATAAAACTCATATAGATATGCAAGGGCACAATGGACAATTAACATCTTCTACACATTCTAAAAAGGTAGGAGAAGTCGTTTTGCCAAAT
ATTTTTCTACAGAATAAGCTAGCTAGAAAAATTAAGTTTCCATACGAGCCAGAGCTATTTTCTCACGAAAGCCGTGCCGAGCCTTGTATGCCGAACCCGG
ACATTCGACTCAACAGTGTTCTGAAGAGCTCGAGGCAGTGCTCCTGGTCCAGGTTCCTGCTCCAGAACTTGCCGTAGTACTCGGCGTAGGTGTACTCCTC
GTGCACGGCCGTGGAGATGAGCTGGTCCGCCATGCCCTGATGCTCGGCTTGAGTGCTGCTCTGTGTGAATTGTGATGTTGTGCTGCTGCGCGAGTGCGAG
CTCC