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Detailed information on CNT3067750


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT000104, E-value = 4e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693051Leersia perrieriOryza sativa96.6319.3797.67258forward
CNT30378684Leersia perrieriArabidopsis thaliana95.8825.290.23256forward
CNT30403312Leersia perrieriBeta vulgaris32.212.5287.2186forward
CNT30300827Leersia perrieriTriticum aestivum9722.7896.53259forward
CNT30540534Leersia perrieriBrassica napus95.8822.388.67256forward
CNT30555706Leersia perrieriOryza glaberrima35.9614.0197.9296forward
CNT30145113Leersia perrieriMedicago truncatula82.7767.3892.76221forward
CNT30441777Leersia perrieriAegilops tauschii974696.14259forward
CNT3059907Leersia perrieriArabidopsis lyrata68.9136.1589.13184forward
CNT3018289Leersia perrieriZea mays979.9896.14259forward
CNT30655381Leersia perrieriRosa chinensis86.5243.1888.74231forward
CNT30627894Leersia perrieriDaucus carota95.8825.188.67256forward
CNT30684652Leersia perrieriTriticum urartu9733.5196.91259forward
CNT30484609Leersia perrieriChara braunii48.6933.0883.85130forward
CNT3058324Leersia perrieriAmborella trichopoda96.6337.3986.05258forward
CNT30147990Leersia perrieriBrachypodium distachyon9717.1196.53259forward

Expression of CNT3067750

Peptides detected in this lncRNA

>peptide 1 (38 aa)
HNGRSVEQLAHKDCHCITTHQQMQLPKLGKSAIRSPQK*

Sequence

>CNT3067750
ACATAATGGAAGAAGTGTAGAACAATTAGCTCATAAGGACTGCCATTGTATAACTACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATC
CGATCGCCGCAGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCATAAATAAAGAACCAGAAACAGGCTCGCGAATACCATCAATATCTACTGGA
GGGGCTGCGATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC