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Detailed information on CNT30677406


BLAST search results

BLAST vs Swiss-Prot:
sp|P46257|ALF2_PEA, E-value = 4e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702712Setaria viridisQuercus lobata26.7618.1684.21152forward
CNT30727836Setaria viridisCorchorus capsularis27.1141.482.47154forward
CNT30708796Setaria viridisGlycine max24.6529.2983.57140forward
CNT30538767Setaria viridisBrassica napus17.2523.983.6798forward
CNT30662744Setaria viridisTriticum dicoccoides35.9238.288.24204forward
CNT30462400Setaria viridisSaccharum spontaneum39.2616.3989.69223forward
CNT30610723Setaria viridisGossypium raimondii37.541.2880.75213forward
CNT30684371Setaria viridisTriticum urartu22.1834.3388.1126forward
CNT30345066Setaria viridisEragrostis tef37.8538.9591.63215forward
CNT30479625Setaria viridisArabidopsis halleri17.2529.6183.6798forward
CNT30620107Setaria viridisCajanus cajan26.9411.0183.66153forward
CNT30570222Setaria viridisVitis vinifera38.3843.6983.03218forward
CNT3037127Setaria viridisCucumis melo34.8636.7380.81198forward
CNT30104026Setaria viridisOryza rufipogon38.224.5891.24217forward
CNT30557232Setaria viridisPanicum hallii38.0332.4892.13216forward

Expression of CNT30677406

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MPRVGALDALEYHIVLSQVVEGLGPHLLCNLEGPLDAVLTVKKDFRLHNWHQAVV

Sequence

>CNT30677406
GCTCTTACTTGGGTCAAGCCTGAGCTGTTCAGACCAACACCTCTAGTACCAGCATACCACAGGCCACATAAGGTAGTAACCATGTGAATGCGAACCTGCA
GTACCAGCATACCGAGGATAGTAAAATCGCAGTGTACTCTTTGTCCCATCTGAACCTGTAATATGGCACACTGTAGGTACTAGGCTACTAGCAGCGCGTA
TTAGTAGACGTAGTTCTTGACGAACATTCCCTCCTTGGCCTCGGCGGCCTCGCCGTCGGAGGTGTACTTGCCGAGCTGCGCCAGGGAGTTGGCCTTGGCG
CGGAGCAGCAGAGCATCCTGAGCCGCCTTCACGTTCTCTGGCCGGCCGCCCCATGTCTTGAGGCAGGTGTTCTGAAGAGCCCTGGCGTAGGAGAAGGACA
CATGCCACGGGTTGGGGCTCTGGATGCCCTCGAATATCACATTGTTCTCAGCCAGGTAGTAGAAGGTCTCGGCCCACACCTTCTGTGCAACCTCGAAGGT
CCTCTCGATGCCGTGCTCACCGTCAAGAAGGATTTCAGGCTCCACAATTGGCACCAGGCCGTTGTCCT