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Detailed information on CNT30677365


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30348730Setaria viridisEragrostis tef44.5164.4991.77158reverse complement

Expression of CNT30677365

Peptides detected in this lncRNA

>peptide 1 (75 aa)
PRPQQVISQTASKTPTAVQAEQHFFACWDSQQPHCAAVAGLTLRLKMTRHMITIKAVVPFPSIASSCCYLPWLPS*

>peptide 2 (74 aa)
TSATAGDLADCVEDTHSSTSRTTFFCLLGFAAAALCRGGRVNIEAQDDQAHDHHQSSSTLSLHCLLLLLPSLVT*

Sequence

>CNT30677365
AACCTCGGCCACAGCAGGTGATCTCGCAGACTGCGTCGAAGACACCCACAGCAGTACAAGCAGAACAACATTTTTTTGCCTGTTGGGATTCGCAGCAGCC
GCACTGTGCCGCGGTGGCCGGGTTAACATTGAGGCTCAAGATGACCAGGCACATGATCACCATCAAAGCAGTAGTACCCTTTCCCTCCATTGCCTCCTCT
TGCTGCTACCTTCCTTGGTTACCTAGCTAAGTTTATTGGTTTTGTGTTGAGAGGTCACCCCATATGGTGAACAATTTATTGGAGATAAACATTAACATAA
CTTGGCCATAGCTTGAAGCATAGTAACATATGCCTATGAATGGCATTCATGCTAT