Detailed information on CNT30677293


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002444, E-value = 2e-162

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30487788Setaria viridisOlea europaea21.096.4887.6489forward

Expression of CNT30677293

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSRRLILQHARGQRSLFPPTAWELSTVSCSISLPTGGSFHLSLT

>peptide 2 (64 aa)
MKTRFQYSFSGFHSLNQAIAYESPAHSSTRTRSEITFPSHCLGAQHSFMFYFTTHWGFFSPFPHG

Sequence

>CNT30677293
ACCGCTCGCGTAGCCCGCACTGAAACCGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTCGCTCTGGGT
TCGAGTAGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCAATTCGGACCTCTGCTTAGTTTCATCCAAGCTTCATCCTGGTTT
GGGTCCATAAGCAGTGACAATCACCCTATGAAGACTCGCTTTCAATACAGCTTCAGTGGGTTCCATTCCCTTAACCAAGCCATTGCCTATGAGTCGCCGG
CTCATTCTTCAACACGCACGCGGTCAGAGATCACTTTTCCCTCCCACTGCTTGGGAGCTCAGCACAGTTTCATGTTCTATTTCACTACCCACTGGGGGTT
CTTTTCACCTTTCCCTCACGGT