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Detailed information on CNT30677209


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 1e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378667Setaria viridisArabidopsis thaliana55.3825.7492.01288forward

Expression of CNT30677209

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMGDKLHRREGNSPGDCLPKTQVDSFYKA*

>peptide 2 (59 aa)
MLLEPRASWFSPKCVEAQQLTGHLGVKHGFSAGYASGTKLRQTLNTRYDPKITGVKIGQ*

Sequence

>CNT30677209
CACCGTGAGGGAAAGCGAGTCTTCATAGGGTGATTGTCACTGCTTATGGACCCAAACCTAGGTGATCTATCCCTGACCAGGATGAAGCTTGGATGAAACT
AAGCAGAGGTCCGAATTGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCTACTCGAACCCAGAGCGAGCTGGTTCTCCCCGAA
ATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACGGTTTCAGTGCGGGCTACGCGAGCGGTACCAAATTAAGGCAAACTCTGAATACT
AGGTATGACCCAAAAATAACAGGGGTCAAGATCGGTCAATGAGATGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGGCGACTGTTTACCA
AAAACACAGGTAGACAGTTTCTACAAGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGACATTGGTCCTCGAGTG
CAAAGGTAGAAGGGAGCGAA