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Detailed information on CNT30677192


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524487Setaria viridisSetaria italica78.1243.6397.25582forward

Expression of CNT30677192

Peptides detected in this lncRNA

>peptide 1 (29 aa)
TALTWVKPELFRPTPLVPAYHRPHKVVTM*

Sequence

>CNT30677192
CACTGCTCTTACTTGGGTCAAGCCTGAGCTGTTCAGACCAACACCTCTAGTACCAGCATACCACAGGCCACATAAGGTAGTAACCATGTGAATGCGAACC
TGCAGTACCAGCATACCGAGGATAGTAAAATCGCAGTGTACTCTTTGTCCCATCTGAACCTGTAATATGGCACACTGCCTACAGTGTGCCCTCGAGGTAG
GTACTAGGCTACTAGCAGCGCGTATTAGTAGACGTAGTTCTTGACGAACATTCCCTCCTTGGCCTCGGCGGCCTCGCCGTCGGAGGTGTACTTGCCGAGC
TGCGCCAGGGAGTTGGCCTTGGCGCGGAGCAGCAGAGCATCCTGAGCCGCCTTCACGTTCTCTGGCCGGCCGCCCCATGTCTTGAGGCAGGAGGGATCCT
TCTGCGGAGGAGCTTGAGGGTGTAGTCGGCAACTTGCTGAGGGGTGGCCCTGTCCTTGCACTCAGCACCAGGGGTGACCATGCTGGGCTTGAGGAGGATG
CCCTCGAATATCACATTGTTCTCAGCCAGGTAGTAGAAGGTCTCGGCCCACACCTTCTGTGCAACCTCGAAGAGGATAGCACCAGAGATGTACTGTCCCA
GTCCCGGAGCACTGACAAGGAGGGTCCTGTAAGCCTGGCGGTTGGCCTCAGTGTTCTCTAGGCCAATGGAGTCAAGCCTCTTGCCGCAGGTAGCGTTTGA
CTCATCCATGGCAAGGATACCCCTTCCTGGAGATGCGATGGTTTT