Detailed information on CNT30677182


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223236Setaria viridisHordeum vulgare22.8711.4696.0851forward
CNT30555402Setaria viridisOryza glaberrima21.525.9710048forward

Expression of CNT30677182

Peptides detected in this lncRNA

>peptide 1 (71 aa)
TKWFLAPLDNLHAWHIHRTLTHTLFPGKIKRSSSLSQAGRPLGGAGDDGEQRAPPLPQTHSSEEELQEGDG*

>peptide 2 (73 aa)
ERNGFLPLLIIYTHGTFIGPSHTHCFRVRSNAAAASHRLGVLSAAPEMTVSSERRHCHRPTVQRKNCRRGMADG

Sequence

>CNT30677182
GAACGAAATGGTTTCTTGCCCCTCTTGATAATTTACACGCATGGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCAG
CAGCCTCTCACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGCGAGCGCCGCCATTGCCACAGACCCACAGTTCAGAGGAAGAATTG
CAGGAGGGGGATGGCTGATGGGC