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Detailed information on CNT3067718


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30668444Leersia perrieriTriticum dicoccoides60.4569.8391.56486forward
CNT30583297Leersia perrieriEchinochloa crusgalli60.3225.2390.93485forward

Expression of CNT3067718

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIRAHLFIKLLQAALQQQNVSRRHQTRLNEYTLQVVHNATGQT*

>peptide 2 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVSVFTKICI

>peptide 3 (53 aa)
MPSLSWILAFTLSIVSEDSTSRVMVLPVRVFTKICIPPLSLRTRWRVDSFWML*

Sequence

>CNT3067718
AAGATAAAACAAGTGTTGCAGGGCATAAAACATAACAGAATCAGAGCAATAGCTTAATCACCGACTCCGAGCACTCAAACAAGCGAGTCAAATATTTTAG
CAAAACATATAACGCAGATGATTAGGGCTCACTTATTCATTAAGTTGCTCCAAGCTGCTCTACAGCAGCAAAATGTTTCCAGACGCCACCAAACCAGACT
TAACGAATACACATTACAGGTAGTTCACAATGCCACAGGACAGACTTAGACACAACGGACACGAACAAGACACGCAGACTCCATAGGGAAGACAGCCAGA
CTTGTGAACCCTAGAACAGCAGCAGCTCCATGGCCGATGACTTACTGACCACCACGGAGGCGTAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGT
AATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC
ATTGTCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATCCCACCCCTGAGCCTGAGAACCAGG
TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGC
CCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTG
CATC