Detailed information on CNT30677151


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30250642Setaria viridisAvena sativa20.743.3891.1145reverse complement
CNT30581642Setaria viridisEchinochloa crusgalli49.775.2288.89108forward

Expression of CNT30677151

Peptides detected in this lncRNA

>peptide 1 (64 aa)
PRTAPSSASSPTRSPSPCTRGGARRRRGIPRPCPSSWRVESIEGCRETGLHQAMGFVLVTHQVS*

>peptide 2 (39 aa)
VLVQLRPLHLLRQGLHPHVQEEEPDVGEVFPARAQALGV*

Sequence

>CNT30677151
GTCCTCGTACAGCTCCGTCCTCTGCATCTTCTCCGACAAGGTCTCCATCCCCATGTACAAGAGGAGGAGCCAGACGTAGGAGAGGTATTCCCCGCCCGTG
CCCAAGCTCTTGGCGTGTAGAGTCGATCGAAGGTTGCAGAGAGACCGGACTGCACCAAGCGATGGGCTTCGTCTTGGTTACGCACCAGGTGTCTTAGGCA
GCTAAGCCGGCCGGGGT