Detailed information on CNT30677059


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223445Setaria viridisHordeum vulgare21.1717.9297.3776forward
CNT306938Setaria viridisZea mays22.8410.3398.7882forward
CNT30721254Setaria viridisTriticum spelta21.1713.6497.3776forward
CNT30353505Setaria viridisEragrostis tef22.019.8897.4779forward

Expression of CNT30677059

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MTVSRLLPKGSLRCLASAAIATDPQFRGRIAGGGWLMGVCG

Sequence

>CNT30677059
TGGAAGTTGGAATCTTAAACGAGCGATCAATTAAGTAGCATGTCTCAGGCACAAATTCTAACAGCAGTCATATCAGATATTCAGATCAGAGATCGGAACG
AAATGGTTTCTTGCCCCTCTTGATAATTTACACGCATGGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCAGCAGCC
TCTCACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGGCGAGCGCCGCCATTGCCA
CAGACCCACAGTTCAGAGGAAGAATTGCAGGAGGGGGATGGCTGATGGGCGTTTGTGGA