Detailed information on CNT30677041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555388Setaria viridisOryza glaberrima31.8426.7994.07135forward
CNT30663056Setaria viridisTriticum dicoccoides30.953.2593.13131forward
CNT30117889Setaria viridisOryza nivara41.9831.595.51178forward

Expression of CNT30677041

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MTVSRLLPKGSLRCLARFSTGPSPVTYAWMKKANMENMASRPFLISFTLRMAAW*

Sequence

>CNT30677041
TCAACTTGGAAGTTGGAATCTTAAACGAGCGATCAATTAAGTAGCATGTCTCAGGCACAAATTCTAACAGCAGTCATATCAGATATTCAGATCAGAGATC
GGAACGAAATGGTTTCTTGCCCCTCTTGATAATTTACACGCATGGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCA
GCAGCCTCTCACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGTGCTTGGCGAGGTTCTCGA
CGGGGCCCTCGCCGGTGACGTACGCCTGGATGAAGAAGGCGAACATGGAGAACATGGCGAGCCGGCCGTTCTTGATCTCCTTCACCTTGAGGATGGCGGC
CTGGTAGATCCTCCTGTCAGGGCC