Detailed information on CNT30677036


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43193|NLTP1_SORBI, E-value = 1e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30591965Setaria viridisMusa acuminata23.455.5690.5753forward
CNT3068317Setaria viridisLeersia perrieri51.7723.489.74117forward
CNT30682526Setaria viridisTriticum urartu36.7315.9685.5483forward
CNT30352810Setaria viridisEragrostis tef38.512.2788.5187forward
CNT30498573Setaria viridisDigitaria exilis41.5919.7190.4394forward

Expression of CNT30677036

Peptides detected in this lncRNA

>peptide 1 (74 aa)
LEQSVEVLMEYGMLTPHLDGMLAALPALSPLIPLAAFLSASHADVRVPVLAASCAVVDGSDDVLYKLLGKNVLCF

>peptide 2 (43 aa)
PGAVGGGADGVWDADAALGWDAGGVAGVESADPPGGVLEREPC*

Sequence

>CNT30677036
CCTGGAGCAGTCGGTGGAGGTGCTGATGGAGTATGGGATGCTGACGCCGCACTTGGATGGGATGCTGGCGGCGTTGCCGGCGTTGAGTCCGCTGATCCCC
CTGGCGGCGTTCTTGAGCGCGAGCCATGCTGATGTGCGTGTTCCTGTGCTAGCTGCTAGCTGCGCTGTGGTCGATGGATCGGACGATGTGCTCTACAAGC
TGCTTGGGAAGAATGTGCTTTGCTTT