Detailed information on CNT30676908


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390938Setaria viridisTriticum turgidum23.929.529650forward
CNT30117784Setaria viridisOryza nivara48.832.6999.02102forward

Expression of CNT30676908

Peptides detected in this lncRNA

>peptide 1 (68 aa)
RNGFLPLLIIYTHGTFIGPSHTHCFRVRSNAAAASHRLGVLSAAPEMTVSRLLPKGSLRVLPSRSRAPV

>peptide 2 (68 aa)
TKWFLAPLDNLHAWHIHRTLTHTLFPGKIKRSSSLSQAGRPLGGAGDDGEQVVAEGVAEGVAVQEQGAG

Sequence

>CNT30676908
ACGAAATGGTTTCTTGCCCCTCTTGATAATTTACACGCATGGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCAGCA
GCCTCTCACAGGCTGGGCGTCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGGTTGTTGCCGAAGGGGTCGCTGAGGGTGTTGCCGTCCAGGAGCAGGG
CGCCGGTCT