Detailed information on CNT30676816


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618985Setaria viridisSesamum indicum34.397.1993.4276forward
CNT30198198Setaria viridisPisum sativum21.723.3689.5848reverse complement
CNT30304119Setaria viridisTriticum aestivum42.0826.5796.7793reverse complement
CNT30220156Setaria viridisHordeum vulgare52.949.397.44117reverse complement
CNT30540533Setaria viridisBrassica napus33.034.2791.7873forward
CNT30447572Setaria viridisSaccharum spontaneum81.4510.4698.33180reverse complement
CNT30649878Setaria viridisRosa chinensis30.3230.5988.0667reverse complement
CNT30684618Setaria viridisTriticum urartu27.66.496.7261reverse complement
CNT30720298Setaria viridisTriticum spelta50.2350.2397.3111forward
CNT30349424Setaria viridisEragrostis tef66.5233.6487.76147reverse complement
CNT30578475Setaria viridisOryza barthii30.322.9597.0167forward

Expression of CNT30676816

Peptides detected in this lncRNA

>peptide 1 (72 aa)
NQKSLGRAGSKCWLGKGKNIVIVLFFVAVSKYVTRNMENCIFGICNNAMGERQELNLRMVDSQSTALIHLATS

Sequence

>CNT30676816
TGAACCAAAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGAAAAGGAAAAAATATAGTGATAGTTTTATTCTTCGTCGCCGTAAGTAAATACGT
AACTAGGAATATGGAAAATTGCATTTTTGGAATTTGCAATAATGCGATGGGCGAACGACAGGAATTGAACCTGCGCATGGTGGATTCACAATCCACTGCC
TTGATCCACTTGGCGACATCC