Detailed information on CNT30676755


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690874Setaria viridisOryza sativa20.6128.8588.6488forward
CNT30455661Setaria viridisSaccharum spontaneum22.728.6585.5797forward
CNT30575412Setaria viridisOryza barthii20.6112.5988.6488forward

Expression of CNT30676755

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MLRANMVSVVAVLLGVLLLVALVEGVASGAHGGDGGHLLLDPVAVLVVVVLLLGHDLLVKERFKYMFLCKVIRGEMIVGFLD

>peptide 2 (35 aa)
QKHKANKARRPDAHAYYSRLDLQLIREHRGSRSSS*

Sequence

>CNT30676755
ACAGAAACACAAAGCAAATAAAGCGCGGCGGCCGGATGCGCACGCTTATTACTCAAGGCTTGATTTGCAGTTGATACGGGAACACCGAGGATCCAGATCG
AGTTCCTAGGTGCAGATATCAGTCCAAATCAAGACCTGACGCACACGAATCGAAAGAGAAGAATCAAGCAGTGGCGATAAGATGCTTCGGGCGAACATGG
TTTCAGTTGTGGCCGTGCTTCTTGGCGTCCTTCTTCTCGTGGCGCTCGTGGAAGGCGTAGCCAGCGGAGCCCACGGCGGCGACGGCGGCCACCTCCTCCT
TGATCCGGTGGCCGTGCTCGTGGTGGTGGTGCTTCTCCTCGGCCATGACTTGCTTGTCAAAGAAAGATTCAAATATATGTTTCTCTGCAAAGTTATCAGG
GGGGAGATGATCGTCGGCTTCTTGGAT