Detailed information on CNT30676677


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523732Setaria viridisSetaria italica45.4921.03100106forward

Expression of CNT30676677

Peptides detected in this lncRNA

>peptide 1 (47 aa)
HLVVGKGGGETSTGCTNAIRRDHARLHNYYMPPGAHPHSGTGQQLMN*

>peptide 2 (61 aa)
PSGRRKRRRRNLHRMHERDPTRSRTPAQLLHAARGTSAQRHRAAADELIKPGELRPTARWW*

Sequence

>CNT30676677
CCATCTGGTCGTAGGAAAAGGAGGCGGAGAAACCTCCACAGGATGCACGAACGCGATCCGACGAGATCACGCACGCCTGCACAATTATTACATGCCGCCC
GGGGCACATCCGCACAGCGGCACAGGGCAGCAGCTGATGAATTAATTAAGCCAGGGGAGCTTCGGCCTACAGCGCGGTGGTGGTAGAAGAGACACGGTCG
TCTCAGGCTCACAGCGCAGGAGCGAGTGGTGTG