Detailed information on CNT3067646


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672859Leersia perrieriSetaria viridis21.8420.1895.5645forward
CNT30135654Leersia perrieriLolium perenne21.3620.7590.9144forward
CNT30351340Leersia perrieriEragrostis tef21.8415.6891.1145reverse complement
CNT30597191Leersia perrieriOryza meridionalis30.121.3896.7762forward
CNT30371494Leersia perrieriOryza glumipatula30.19.0596.7762forward
CNT30104556Leersia perrieriOryza rufipogon30.122.7195.1662forward

Expression of CNT3067646

Peptides detected in this lncRNA

>peptide 1 (44 aa)
KKKKKELKQTHHSCTCMHLILPPLLTLPKVEVAEEAMTVGAIAT*

>peptide 2 (47 aa)
KKKEKRAETNASLLYLHALDPSSVADVAEGGGGRGGHDGGGHSYVVS*

Sequence

>CNT3067646
AAAAAAAAAAGAAAAAAGAGCTGAAACAAACGCATCACTCTTGTACCTGCATGCACTTGATCCTTCCTCCGTTGCTGACGTTGCCGAAGGTGGAGGTGGC
CGAGGAGGCCATGACGGTGGGGGCCATAGCTACGTAGTTAGCTAGCTAGCTTAGCTAGTAGTATGTGTTTAATAGTAAGGGACGACGGCTCGAGTTGAGG
CCCTGT