Detailed information on CNT30676336


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30386779Setaria viridisTriticum turgidum21.55.7493.0243forward
CNT30436289Setaria viridisAegilops tauschii21.59.5193.0243forward

Expression of CNT30676336

Peptides detected in this lncRNA

>peptide 1 (52 aa)
ADVDAALAWDVGGVAHAGAASAEPPGHALEAGAIAHATTSVYCVTTDLISEV*

>peptide 2 (44 aa)
TPTLTPHLLGMLAALPMLAPPPPSLPVMLLRQEPLHTQRQVYTV*

Sequence

>CNT30676336
ACGCCGACGTTGACGCCGCACTTGCTTGGGATGTTGGCGGCGTTGCCCATGCTGGCGCCGCCTCCGCCGAGCCTCCCGGTCATGCTCTTGAGGCAGGAGC
CATTGCACACGCAACGACAAGTGTATACTGTGTGACTACTGATCTGATCAGTGAAGTGTAAGCTAGCTGATTGTTTGGTAGTATTAGCTTGGATTGCTGA