Detailed information on CNT30676219


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 5e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696990Setaria viridisOryza sativa59.6716.7695.86145forward
CNT3068331Setaria viridisLeersia perrieri60.0819.0497.26146forward
CNT30371334Setaria viridisOryza glumipatula59.6717.1295.86145forward
CNT30578122Setaria viridisOryza barthii59.6718.495.86145forward

Expression of CNT30676219

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MPSLASAASPSEVYLPSCASELALARSSSAFCVASTSDCPPERNMMPGTEGGMRRWRSFRV

>peptide 2 (79 aa)
QYVSSELLADELVAVVLDEHALLGLGGLAVGGVLAELRQRVGLGAQQQRVLRRLHLRLPAGEEHDAGDGGRDAAVEELQG

Sequence

>CNT30676219
CCAGTATGTATCGTCGGAGTTGCTAGCCGATGAATTAGTAGCTGTAGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGCCTCGCCGTCGGAGGTGTA
CTTGCCGAGCTGCGCCAGCGAGTTGGCCTTGGCGCGCAGCAGCAGCGCGTTCTGCGTCGCCTCCACCTCCGACTGCCCGCCGGAGAGGAACATGATGCCG
GGGACGGAGGGCGGGATGCGGCGGTGGAGGAGCTTCAGGGTGT