Detailed information on CNT30676109


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30495125Setaria viridisOlea europaea25.2624.584.9373forward
CNT3084857Setaria viridisVigna radiata37.378.7984.26108forward
CNT30605939Setaria viridisGossypium raimondii20.7610.8991.6760forward

Expression of CNT30676109

Peptides detected in this lncRNA

>peptide 1 (95 aa)
LTRTEPFRNFIEVRPTHSEHYYKIARQETNHPSSSSTTTKTQHHARSSPLAPDAAGELDVLGHDGDALGVDRAEVGVLEQPHEVGRIWWIGMRMRA

>peptide 2 (42 aa)
MRRASWMSLGMMVTRLAWIAQRLVSSNSPTRWGGFGGLECECE

Sequence

>CNT30676109
TCTCACAAGAACAGAGCCATTCAGAAATTTCATTGAAGTGAGACCAACACATTCAGAACATTACTACAAGATAGCACGGCAAGAAACGAACCACCCATCT
AGTTCTAGCACTACAACGAAGACGCAGCATCACGCGCGCTCAAGCCCTCTCGCCCCTGATGCGGCGGGCGAGCTGGATGTCCTTGGGCATGATGGTGACG
CGCTTGGCGTGGATCGCGCAGAGGTTGGTGTCCTCGAACAGCCCCACGAGGTGGGGAGGATTTGGTGGATTGGAATGCGAATGCGAGCT