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Detailed information on CNT3067610


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-96

BLAST vs NONCODE:
NONMTRT002043, E-value = 3e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192776Leersia perrieriSecale cereale26.1948.6992.27466forward
CNT30397839Leersia perrieriTriticum turgidum26.2535.5192.51467forward
CNT30242874Leersia perrieriAvena sativa26.1964.3691.85466forward
CNT30346176Leersia perrieriEragrostis tef28.6127.9890.96509forward
CNT30364225Leersia perrieriSorghum bicolor26.5962.1689.43473forward
CNT30107350Leersia perrieriOryza longistaminata26.2554.1190.36467forward
CNT30576843Leersia perrieriOryza barthii28.7874.6494.73512forward
CNT30116053Leersia perrieriOryza nivara26.2566.4389.72467forward
CNT30592842Leersia perrieriEragrostis curvula25.8656.5891.52460forward

Expression of CNT3067610

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSIVSEDSTSRVMVLPVRVFTKICIPPLSLRTRWRVDSFXML*

>peptide 2 (48 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVSVFTKICICTHN*

>peptide 3 (43 aa)
MIRAHLFIKLLQAALQQQNVSRRHQTRLNEYTLQVVHNATGQT*

>peptide 4 (31 aa)
MSKKATAQIQSETMYSGMQVLGGLDTRLGAP*

Sequence

>CNT3067610
AAGATAAAACAAGTGTTGCAGGGCATAAAACATAACAGAATCAGAGCAATAGCTTAATCACCGACTCCGAGCACTCAAACAAGCGAGTCAAATATTTTAG
CAAAACATATAACGCAGATGATTAGGGCTCACTTATTCATTAAGTTGCTCCAAGCTGCTCTACAGCAGCAAAATGTTTCCAGACGCCACCAAACCAGACT
TAACGAATACACATTACAGGTAGTTCACAATGCCACAGGACAGACTTAGACACAACGGACACGAACAAGACACGCAGACTCCATAGGGAAGACAGCCAGA
CTTGTGAACCCTAGAACAGCAGCAGCTCCATGGCCGATGACTTACTGACCACCACGGAGGCGTAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGT
AATCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC
ATTGTCAATAGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATCCCACCCCTGAGCCTGAGAACCAGG
TGGAGGGTAGACTCCTTCTGNATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGC
CCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTG
CATCTGCACACACAATTAAATAAGCATAGTTAGCCACTGTAAACATGAAATTTTTAACAACGTGATGAGCAAGAAGGCTACAGCACAAATTCAGTCTGAA
ACTATGTATTCAGGAATGCAAGTGTTGGGAGGACTGGACACAAGATTAGGTGCACCTTAAATAGCAATCAGCTTAACTAGTAGTCCTATCTTATTAATTT
AACTAGTATTATCTGAGTAGCACAAAAGGTTGATTGATTAACACAGACATAGTAATTTCCAGGTGCAACAGTTGCATAGGCACGTAAAATTATTCTGAAA
GCTAGTATGTAATCAGATACACAAACTGAATTAAAAGGTCGCAGCCATGGATTAAACTTGAATCGAGTATAATCTAGATCGTTAAACATGAATCGAGTAT
TATCTTTGATGCGTTAAACTAGAATCGAGCAGAATCTGACGGATTAAACATGCGAGTATAATCTAGATGGGTTAAACTAGAATCGGGCAACACCTAGACG
GATTAAACATGAATCGAGTATAATCTTGATGGGTTAAACTAGAATCGAGAAGAATCTAGACGGGTTAAACTAGAATCGAACAGAATATGCACGGATTAAA
CATAAATCGATCAGAATCTAGACGGATTAAACATGAATCGAGTAGAATCTAGGCATCTCTAGATGTACTGAACCAGAACCCAAACAACATTCATGAAATC
GCTACTCATCTAATCATGAACAGATCGAACAATAGTAATATCACAACCCTAGCGCAGCTGTACATCTGATCCAAAACCAAACAACCTATACCTCGATCCC
CAATTTTCCATACCACGCGAACATAGTCTAAACCAACAAATCCACCACGGATCGCAAACAAAAACGACGACGAACAGAGGAGGGATCGGAAACTCGCATA
CCTTGAGAGAGGGCGATTCGACGATCCGCTTCGCTTCGAGGAGAGATTTTTTTTTCTCTGAGATTTGGGTCTCTTCGAT