Detailed information on CNT3067608


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696704Leersia perrieriOryza sativa28.927.6495.5189reverse complement
CNT30522415Leersia perrieriSetaria italica28.5726.2794.3288forward
CNT30727469Leersia perrieriCorchorus capsularis29.2229.6187.7890forward
CNT30711674Leersia perrieriGlycine max28.2528.6287.3687forward
CNT30185912Leersia perrieriSecale cereale44.8148.9489.86138reverse complement
CNT30307334Leersia perrieriTriticum aestivum71.7572.787.33221forward
CNT30227179Leersia perrieriHordeum vulgare92.53100.7183.86285reverse complement
CNT30398547Leersia perrieriTriticum turgidum98.799.6782.24304reverse complement
CNT30561830Leersia perrieriActinidia chinensis28.2528.5287.3687reverse complement
CNT30554032Leersia perrieriOryza glaberrima10064.390.91308forward
CNT30443397Leersia perrieriAegilops tauschii100.32101.6483.17309forward
CNT30662759Leersia perrieriTriticum dicoccoides100101.6583.12308forward
CNT30445279Leersia perrieriSaccharum spontaneum29.5515.5891.2191reverse complement
CNT30130300Leersia perrieriLolium perenne23.0524.5794.3771reverse complement
CNT3015222Leersia perrieriZea mays29.2230.4192.2290forward
CNT30687150Leersia perrieriTriticum urartu98.79582.24304forward
CNT30339268Leersia perrieriEragrostis tef29.2230.7294.4490forward
CNT30368744Leersia perrieriSorghum bicolor87.3474.3185.13269forward
CNT30596339Leersia perrieriOryza meridionalis44.163494.85136reverse complement
CNT30369610Leersia perrieriOryza glumipatula10075.1290.91308reverse complement
CNT30105324Leersia perrieriOryza longistaminata99.0395.6191.15305reverse complement
CNT30150266Leersia perrieriBrachypodium distachyon96.4397.3884.18297forward
CNT30102085Leersia perrieriOryza rufipogon1005692.21308forward
CNT30576754Leersia perrieriOryza barthii10081.9191.23308reverse complement
CNT30116196Leersia perrieriOryza nivara100.6559.1690.97310forward

Expression of CNT3067608

Peptides detected in this lncRNA

>peptide 1 (46 aa)
RAQQRELVTQAGALGWCGRGRMVAGLGLQCNWWPARSKLRSWAGGA*

Sequence

>CNT3067608
GCCGAGCTCAGCAGCGTGAGCTTGTAACCCAAGCGGGGGCATTAGGGTGGTGTGGACGTGGCCGTATGGTTGCTGGCCTGGGTCTGCAGTGCAATTGGTG
GCCCGCCCGTTCCAAGTTGCGTAGTTGGGCCGGCGGGGCTTAAGCGAAAGCTTTAAGGGTCCCACGGTTCCTAGAGTGGCAGGCATTGCGTGAGGCTGGT
TTCACAGAGCAGCGAATACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTGTTGGCCCGGTTGGGCCTCGCAGCCTACTTCAACGAACCA
CCACTTTT