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Detailed information on CNT3067606


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-97

BLAST vs NONCODE:
NONMTRT002043, E-value = 1e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690921Leersia perrieriOryza sativa26.3229.0289.94467forward
CNT30475689Leersia perrieriSaccharum spontaneum26.2763.2391.42466forward
CNT30576589Leersia perrieriOryza barthii29.4361.9295.02522forward

Expression of CNT3067606

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVSVFTKICICTHN*

>peptide 2 (43 aa)
MIRAHLFIKLLQAALQQQNVSRRHQTRLNEYTLQVVHNATGQT*

>peptide 3 (31 aa)
MSKKATAQIQSETMYSGMQVLGGLDTRLGAP*

>peptide 4 (30 aa)
MVFPVRVFTKICMPPLSLSTRWRVDSFWML*

Sequence

>CNT3067606
AAAACAAGTGTTGCAGGGCATAAAACATAACAGAATCAGAGCAATAGCTTAATCACCGACTCCGAGCACTCAAACAAGCGAGTCAAATATTTTAGCAAAA
CATATAACGCAGATGATTAGGGCTCACTTATTCATTAAGTTGCTCCAAGCTGCTCTACAGCAGCAAAATGTTTCCAGACGCCACCAAACCAGACTTAACG
AATACACATTACAGGTAGTTCACAATGCCACAGGACAGACTTAGACACAACGGACACGAACAAGACACGCAGACTCCATAGGGAAGACAGCCAGACTTGT
GAACCCTAGAACAGCAGCAGCTCCATGGCCGATGACTTACTGACCACCACGGAGGCGTAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCA
GCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGT
CGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATGCCACCCCTGAGCCTGAGCACGAGGTGGAG
GGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCC
TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCATCT
GCACACACAATTAAATAAGCATAGTTAGCCACTGTAAACATGAAATTTTTAACAACGTGATGAGCAAGAAGGCTACAGCACAAATTCAGTCTGAAACTAT
GTATTCAGGAATGCAAGTGTTGGGAGGACTGGACACAAGATTAGGTGCACCTTAAATAGCAATCAGCTTAACTAGTAGTCCTATCTTATTAATTTAACTA
GTATTATCTGAGTAGCACAAAAGGTTGATTGATTAACACAGACATAGTAATTTCCAGGTGCAACAGTTGCATAGGCACGTAAAATTATTCTGAAAGCTAG
TATGTAATCAGATACACAAACTGAATTAAAAGGTCGCAGCCATGGATTAAACTTGAATCGAGTATAATCTAGATCGTTAAACATGAATCGAGTATTATCT
TTGATGCGTTAAACTAGAATCGAGCAGAATCTGACGGATTAAACATGCGAGTATAATCTAGATGGGTTAAACTAGAATCGGGCAACACCTAGACGGATTA
AACATGAATCGAGTATAATCTTGATGGGTTAAACTAGAATCGAGAAGAATCTAGACGGGTTAAACTAGAATCGAACAGAATATGCACGGATTAAACATAA
ATCGATCAGAATCTAGACGGATTAAACATGAATCGAGTAGAATCTAGGCATCTCTAGATGTACTGAACCAGAACCCAAACAACATTCATGAAATCGCTAC
TCATCTAATCATGAACAGATCGAACAATAGTAATATCACAACCCTAGCGCAGCTGTACATCTGATCCAAAACCAAACAACCTATACCTCGATCCCCAATT
TTCCATACCACGCGAACATAGTCTAAACCAACAAATCCACCACGGATCGCAAACAAAAACGACGACGAACAGAGGAGGGATCGGAAACTCGCATACCTTG
AGAGAGGGCGATTCGACGATCCGCTTCGCTTCGAGGAGAGATTTTTTTTTCTCTGAGATTTGGGTCTCTTCGAT