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Detailed information on CNT3067584


BLAST search results

BLAST vs Swiss-Prot:
sp|P14947|MPAL2_LOLPR, E-value = 3e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694549Leersia perrieriOryza sativa31.8125.6181.6250forward
CNT30370518Leersia perrieriOryza glumipatula23.2824.2782.51183forward
CNT30102178Leersia perrieriOryza rufipogon32.1931.6681.42253forward
CNT30576665Leersia perrieriOryza barthii31.8146.3881.6250forward
CNT30116939Leersia perrieriOryza nivara23.7930.3683.42187forward

Expression of CNT3067584

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MATLVTRTSLLELEPSPTLKVTAVPHEPTANIAASVAAASRREEEDAIDRRAS*

>peptide 2 (66 aa)
WTYRCIKHRKNQIYKTILMKLDQIYSNNYKTIHSKLMRCTHAYSPHNNTREGHMVVCFILLPTLST*

>peptide 3 (58 aa)
MHIAPTTTRGKGTWWCALFCCRPYRHKITINKLLAHSPASELYLSFKLFRGQLFLPFQ*

Sequence

>CNT3067584
TTTGGACATACAGATGTATTAAACACAGGAAAAATCAAATATACAAAACCATCTTGATGAAGCTTGACCAAATATACTCAAATAATTATAAAACGATACA
TTCAAAATTAATGAGGTGCACACATGCATATAGCCCCCACAACAACACGCGGGAAGGGCACATGGTGGTGTGCTTTATTTTGTTGCCGACCCTATCGACA
TAAAATAACCATAAACAAATTACTGGCTCACTCACCGGCGAGCGAGCTCTACCTCTCTTTTAAATTATTCAGAGGTCAATTATTTCTTCCTTTTCAATAA
TACTGCAAGAGATTAATTTCTTCCTTTTCAATACCCAGAGATCTGCGTGTCTGTCTTGTAGACCGAGCCGACCTTAAACTCGGCGGGGATGACGTCGTCG
ATGACGCGGTAGCCGGCGTTCTTGACGGCGAAGCGGACGGAGAAGGGGCCCTTGAGAGCGGCATAGCCGGAGAGTGTCCAGGTGTTTGTTGAAGACTCCT
TGAGCTCTACCCAGTCCTTGGCTCCCTTCTCCTTCACCTCCACCTCACCAATGGCGACATTGGTGACGAGGACAAGTTTGTTGGAGCTAGAGCCCTCTCC
CACCTTGAAGGTGACCGCGGTGCCGCACGAGCCAACAGCCAATATTGCGGCCAGTGTCGCCGCGGCGAGCAGGAGGGAGGAAGAAGACGCCATCGATCGA
CGAGCTAGCTAGGGACGCACGTATTTATGGGTGGTGGGGGCGAGAATAATCCCATGCTGGGATGTATGGCGCACCATAGAGATCGC