Detailed information on CNT30675680


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596727Setaria viridisOryza meridionalis27.8716.819580forward
CNT30584541Setaria viridisEchinochloa crusgalli30.3117.9895.487forward

Expression of CNT30675680

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MYVLLSPSAHQIGDHSPSTQPEKVWMMVLCHGSDRCCSRNPRNASMASL

>peptide 2 (58 aa)
ITPQYSLSSPCIQHYYNTVLNLLSGLNTHHKLMIHTERNSHRSRFNVCPPVPISPPNW*

Sequence

>CNT30675680
CAATCACCCCTCAGTACTCACTCTCCTCACCATGCATACAGCATTATTACAACACAGTCCTTAATCTCCTCTCCGGATTAAACACACATCACAAACTGAT
GATCCACACAGAAAGGAATTCACATCGATCGCGTTTCAATGTATGTCCTCCTGTCCCCATCAGCCCACCAAATTGGTGATCACTCCCCGTCGACTCAACC
GGAGAAAGTCTGGATGATGGTGTTGTGCCATGGGTCGGACAGGTGCTGCAGCAGGAACCCCAGGAACGCCAGCATGGCCAGCCTCCC