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Detailed information on CNT3067565


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520681Leersia perrieriSetaria italica11.4821.4586.2580forward
CNT30109967Leersia perrieriOryza longistaminata35.8759.5288.4250forward

Expression of CNT3067565

Peptides detected in this lncRNA

>peptide 1 (76 aa)
TEAKPKMSSRGTSSFCNKANFTRIAVVTLLLLTLGILSFTPPSHIESSNTTRKSRLQQLLQRGMLLLQHSQVPSSL*

>peptide 2 (32 aa)
MFLLKTCKGVTYSLSILLVERQSRPPIILFME*

Sequence

>CNT3067565
ACTGAAGCTAAACCGAAGATGTCTAGTAGAGGTACTAGCAGCTTCTGTAACAAGGCCAACTTCACGAGGATAGCCGTTGTAACTTTGCTTCTACTAACCC
TGGGGATTCTTTCCTTTACACCACCTTCACACATTGAAAGTTCAAACACCACTCGAAAATCACGGTTGCAACAACTACTGCAGCGTGGCATGCTGCTACT
GCAACATTCACAGGTTCCCTCCAGTTTGTGAGAAGTGCTGCAAATAACATTTCTAGGAAGGTGCTCAGGCAATTTTGTCCTGTGCAATCTCACCGTCATT
TTGTTATTATCATTTATCTGTTCCTAGTTGGTTCTCTTCGCTGTGTTGAATCAACAATATAAACCTGGCAGTATCAGATTTACCATGGTGTTTCCTTTGA
ATCAGTGTTATTTCAAACTCCGGTATAAGATAGGATACCAAAAGCTACAAAAGCAAGTAAGAATGTAATAGCATAACTTGTAAATAGTTATTTTTAACGT
GCATTTTGTCCAACTGATTTGAAAAACAGTAGGCAAAACAGTTCTTACAAGCATCCTAACAGTACAACTTAGGAAACACCTATAATTGCAAATGTTTCTC
TTGAAAACATGCAAAGGCGTAACCTATTCTCTTTCTATCCTATTGGTAGAACGCCAAAGTAGGCCTCCGATAATATTGTTTATGGAGTGAGAAGCCA