Detailed information on CNT30675629


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 7e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596757Setaria viridisOryza meridionalis23.9137.9396.5988forward
CNT30371008Setaria viridisOryza glumipatula23.9135.6395.4588reverse complement
CNT30103405Setaria viridisOryza rufipogon22.0138.5795.0681reverse complement
CNT30175658Setaria viridisVigna angularis19.5729.1588.8972forward
CNT30558210Setaria viridisPanicum hallii24.7344.1797.891forward

Expression of CNT30675629

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNSFVPDRAMVPRLFTRSDLVIPIPLSMIVRVLE*

>peptide 2 (56 aa)
MMRESSWLISAWKANVSVSEAMARPCFRTRGEGGGAWEEATRVWGKPREPEMRWGGG

Sequence

>CNT30675629
CTGATCATCCTTGAGGCAGAGTAGAAACCAACTCCAAACTGCCCAATCATAGACACATCAGCACCAGCAGCCAGAGCCTCCATGAACTCCTTTGTGCCTG
ACCGTGCAATGGTACCAAGGTTGTTCACGAGATCTGACTTGGTCATACCAATACCACTGTCAATGATTGTCAGAGTGTTGGAGTAGAAGGTGTTGATGAT
GAGGGAGAGCAGCTGGTTGATCTCCGCCTGGAAGGCGAACGTCTCCGTCTCCGAGGCCATGGCGAGACCTTGCTTCCGAACGCGAGGAGAGGGCGGCGGC
GCTTGGGAGGAGGCGACGAGGGTTTGGGGGAAACCGAGGGAGCCTGAGATGAGATGGGGAGGCGGCCA