Detailed information on CNT3067553


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672531Leersia perrieriSetaria viridis12.412792.5954forward
CNT30597069Leersia perrieriOryza meridionalis77.0116.7488.66335forward
CNT30101810Leersia perrieriOryza rufipogon75.1712.988.38327forward
CNT30116702Leersia perrieriOryza nivara77.0132.6288.66335forward
CNT30594307Leersia perrieriEragrostis curvula17.721.9485.7177forward
CNT30551132Leersia perrieriOryza brachyantha55.1762.1893.33240forward

Expression of CNT3067553

Peptides detected in this lncRNA

>peptide 1 (53 aa)
HNAHRSLPDTPTTCTESTHITKEPYNTGQINQNIGGCISSQSSCSIFPSFTIT*

>peptide 2 (39 aa)
MVARGRLRITMLSRQETKHHNGIGQKLPEGSFRQMASPT*

>peptide 3 (34 aa)
FTMHIGHFQIHQPHALRALISRRNHTTQDKLTKT*

Sequence

>CNT3067553
TTCACAATGCACATAGGTCACTTCCAGATACACCAACCACATGCACTGAGAGCACTCATATCACGAAGGAACCATACAACACAGGACAAATTAACCAAAA
CATAGGAGGTTGCATTTCTTCTCAAAGTAGCTGTAGCATCTTTCCTTCTTTCACCATTACATAAGCAGGAAAACAAGCAATAACAGATAATAATCCTCCT
CCTCTACTTGGTAAATATCCAAACACAATACCCTTATAAGTACTTATTATTAGGAAAGTAGCGTGCATATGGGTATAAATGGTAGCAAGGGGCAGGTTAA
GAATCACAATGCTGAGCAGACAGGAAACAAAACATCATAATGGGATAGGGCAAAAGCTTCCGGAAGGGAGCTTTAGGCAGATGGCTTCTCCCACTTGAGG
GGCTTGACCACCTCCCATGAATTGAAGAAGAAGAG