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Detailed information on CNT3067544


BLAST search results

BLAST vs Swiss-Prot:
sp|P51431|R27AB_ORYSJ, E-value = 5e-76

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530180Leersia perrieriEucalyptus grandis10.8233.7895.51178forward
CNT30316655Leersia perrieriCorylus avellana13.7471.7592.92226forward
CNT30545885Leersia perrieriIpomoea triloba13.85091.63227forward
CNT30628786Leersia perrieriVigna unguiculata13.8646.5392.98228forward
CNT30178164Leersia perrieriSecale cereale14.2234.6296.15234forward
CNT30283510Leersia perrieriTriticum aestivum14.2232.5596.58234forward
CNT30220676Leersia perrieriHordeum vulgare15.744695.37259forward
CNT30586129Leersia perrieriMusa acuminata13.6842.2991.56225forward
CNT30435195Leersia perrieriAegilops tauschii15.7444.7396.14259forward
CNT30241998Leersia perrieriAvena sativa14.8330.8197.13244forward
CNT30656101Leersia perrieriTriticum dicoccoides14.2231.4196.58234forward
CNT30456592Leersia perrieriSaccharum spontaneum13.527.0194.59222forward
CNT30130551Leersia perrieriLolium perenne15.7438.0395.75259forward
CNT30719751Leersia perrieriTriticum spelta15.7444.8196.53259forward
CNT30341903Leersia perrieriEragrostis tef15.7430.6994.59259forward
CNT30368046Leersia perrieriSorghum bicolor15.8142.6295260forward
CNT30582206Leersia perrieriEchinochloa crusgalli15.228.1896.4250forward
CNT30499448Leersia perrieriDigitaria exilis14.0430.695.67231forward
CNT30116707Leersia perrieriOryza nivara14.2230.2798.29234forward
CNT30594254Leersia perrieriEragrostis curvula15.7431.2496.14259forward

Expression of CNT3067544

Peptides detected in this lncRNA

>peptide 1 (65 aa)
LCNNTFNNVTDKPPQDAPHKFQITTTKTFIIYSNYRNYQKKKNWPRLEDNFNRNLNGRPKKIATE*

>peptide 2 (80 aa)
MRRCWSGGIPSLSWILAFTLSMVSEDSTSSVMVFPVRVFTKICILNGGGRSPPLLRRRRRRRGGEAAAAAVWGKEVARVSA

>peptide 3 (45 aa)
MQQVKGNKKLTRNASPHHQFSNRYSNIQLLQQVLNFKDRPKRISE*

>peptide 4 (46 aa)
MTATLADQEMKHICYYSSDIISKQYSKEFSTNDSIEAGLRTIASII*

>peptide 5 (34 aa)
MLLRAQVDKKSASFESKHQGNCILLHHLRYRTVI*

Sequence

>CNT3067544
AACTCTGTAACAATACATTCAACAATGTCACAGACAAACCCCCACAAGATGCACCGCATAAATTTCAGATAACGACCACAAAGACATTCATTATATACTC
AAACTACAGAAATTATCAAAAAAAAAAAAACTGGCCACGTCTAGAAGACAACTTTAACCGAAATTTAAACGGACGGCCCAAAAAGATTGCAACCGAATGA
GGTAAATGGTTCATGTAAACAAGCTGCTAACCAAACAGTAACCGTAGCACAGAACTTTCAATCAAGAAATAATCAAAAAAATATATGTTGCTGCGTGCCC
AAGTTGATAAAAAATCGGCTTCGTTTGAGAGTAAACATCAGGGCAATTGCATCCTCCTACATCACCTCAGGTATAGAACTGTTATCTAATTTTTAATGTG
CTTTTAAAGGATAGTAGACAACCAGTTTAAAATAGTCACATGATCACATCTTTATGGTAAAATAGTCATGACCGCCACATTAGCAGACCAAGAAATGAAA
CACATCTGCTACTACTCATCTGACATCATCAGCAAACAATATAGCAAGGAATTTTCCACAAATGACTCCATTGAGGCTGGCCTCAGAACAATTGCATCTA
TCATATGAACAGAATCCTAAAAACCTTTTCTGGTTGCGACTGTGATCTGACCAATATCAGAGTAACATATTAATATATTTAATCTAAGCAAGCATATGCC
ACATTAAATCACCATCATCCAAAAGGAACAAAGAACAAGATTAAACTCAGCACTGCATCAGCAATTCAGTAACAGATAACATCACAATTGCATCCCACTC
AATCGCCAGAAAAAAAATACAGCAAAAAAAACCTATCTAATTGCCCCCAGTTATCGCATCAAAATCATAGCTAAACATGCAACAGGTAAAGGGAAACAAA
AAATTAACTCGCAACGCATCACCGCATCATCAATTCAGTAACAGATATTCCAATATCCAACTACTCCAACAAGTTCTCAATTTCAAAGACAGACCAAAAC
GCATATCTGAATAAGATTTAACAGCTCAGCTCATGATAGATAAAGACATGAAAAAGCAATCAACCTAGGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCA
CTTGCCGCAGTAGTGGCGATCAAAGTGATTGGCCATGAAAGTCCCCGCGCCGCAGTCGTTGTTGGGGCACTCCTTCCTGAGGCGAGTAACCTTGCCGGTG
GCGTCATCCACCTTGTAGAACTGAAGCACAGCAAGCTTCACCTTCTTGTGCTTGTGCTTCAGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCT
TGGCGCCGCCACGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA
GATGAGGCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC
TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGAACGGCGGTGGGAGGTCGCCTCCGCTGCTGCGGCGGCGACGGCGGCGGCGAGGAGGGGAGGCGG
CGGCGGCGGCGGTGTGGGGAAAGGAGGTGGCTAGGGTTTCGGCGG