Detailed information on CNT3067537


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674625Leersia perrieriSetaria viridis46.7848.5993.48138forward
CNT30300733Leersia perrieriTriticum aestivum62.3788.0491.85184forward
CNT30220567Leersia perrieriHordeum vulgare66.185.1590.77195forward
CNT30390355Leersia perrieriTriticum turgidum63.7327.0992.55188forward
CNT30552256Leersia perrieriOryza glaberrima30.5134.7592.2290forward
CNT30437708Leersia perrieriAegilops tauschii30.5128.8592.2290forward
CNT30239987Leersia perrieriAvena sativa22.3710.7590.9166forward
CNT3015775Leersia perrieriZea mays66.17.4892.82195forward
CNT30688894Leersia perrieriTriticum urartu66.123.2492.31195forward
CNT30352524Leersia perrieriEragrostis tef24.4117.1888.8972forward
CNT30148543Leersia perrieriBrachypodium distachyon63.3910.0692.51187forward
CNT30116966Leersia perrieriOryza nivara33.562.7692.9399reverse complement
CNT3039583Leersia perrieriMarchantia polymorpha36.9526.9190.83109forward

Expression of CNT3067537

Peptides detected in this lncRNA

>peptide 1 (39 aa)
IVLRQPRFHGLGFSHFARRYYENRFCFLFRSHSVGSSKG*

>peptide 2 (36 aa)
MLIFNSPKHFVTCYALPRLWVPRYPPQAFPFFYPCH*

Sequence

>CNT3067537
GTATTGTTCTCCGACAACCCCGTTTTCATGGTTTAGGCTTCTCCCATTTCGCTCGCCGTTACTATGAGAATCGCTTTTGCTTTCTTTTCCGCTCACATTC
AGTAGGCAGTTCAAAAGGTTGATCTATTTGAGAATCTCCGGATCTATGCTTATTTTCAACTCCCCAAAGCACTTCGTCACTTGCTACGCCCTTCCTCGTC
TCTGGGTACCTAGGTATCCACCACAAGCCTTTCCTTTTTTTTATCCTTGCCATTAACGTTAAGGCTATGCCATCCTAAGGTGCTACCAAATAGAA