Detailed information on CNT30675347


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZPN9|TBB2_ELEIN, E-value = 3e-44

BLAST vs NONCODE:
NONBNAT007651, E-value = 2e-44

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30570854Setaria viridisVitis vinifera51.9274.1389.93149forward

Expression of CNT30675347

Peptides detected in this lncRNA

>peptide 1 (66 aa)
PMQESLPPEHSSELLTHTAEHLLDGGGVSDEGGGHGEEEFLFWTLIICSSTSLVLILPRNMAEAVR*

>peptide 2 (44 aa)
QCKKAFLLNIAVNCSLTRRNISWMEVEFPMKVEAMERKSSCSGH*

Sequence

>CNT30675347
ACCAATGCAAGAAAGCCTTCCTCCTGAACATAGCAGTGAACTGCTCACTCACACGGCGGAACATCTCCTGGATGGAGGTGGAGTTTCCGATGAAGGTGGA
GGCCATGGAGAGGAAGAGTTCTTGTTCTGGACATTGATCATCTGCTCGTCCACCTCCTTGGTGCTCATCTTGCCACGGAACATGGCAGAGGCCGTGAGGT
AGCGGCCGTGGCGCGGGTCAGCAGCGCACATCATGTTCTTGGCATCCCACATCTGCTGGGTCAGCTCAGGGACGGTGAGGGCACGGT