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Detailed information on CNT30675250


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LGU6|METK3_ORYSJ, E-value = 2e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190465Setaria viridisSecale cereale49.3451.7493.96149forward

Expression of CNT30675250

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MENGLLIKVLLRDDRLNDMLLQISSDFIIGHSLIMLGGDEHSVDTNRDHGPIVVGVRQKRNGVAVAVDPTRCAGRR

>peptide 2 (80 aa)
TTMGTPATISVNNDLPASEAGVTMRWKMVFSSRYCSGMTGLMTCSFRSAAISSLVTVSSCWVEMSTVWTRIGTMAPLSLG*

Sequence

>CNT30675250
ACCACCATGGGCACCCCAGCCACCATAAGTGTCAATAATGATCTTCCTGCCAGTGAGGCCGGCGTCACCATGAGATGGAAAATGGTCTTCTCATCAAGGT
ACTGCTCAGGGATGACAGGCTTAATGACATGCTCCTTCAGATCAGCAGCGATTTCATCATTGGTCACAGTCTCATCATGTTGGGTGGAGATGAGCACAGT
GTGGACACGAATAGGGACCATGGCCCCATTGTCGTTGGGGTGAGACAGAAACGAAACGGCGTAGCAGTAGCAGTAGATCCGACCCGCTGTGCCGGCCGAC
GC