Detailed information on CNT30675205


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30483255Setaria viridisChara braunii37.7412.3286.13137forward
CNT3026117Setaria viridisPopulus trichocarpa29.7525.1785.19108forward
CNT30497675Setaria viridisDigitaria exilis91.4655.790.66332forward

Expression of CNT30675205

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MFIDPQTGIRDNQMQSVFNTKLVTTIRRETSFKRAHLTWPSSPSRTPRS*

Sequence

>CNT30675205
ACCAATATAACACAAATGTAATACAATCGCAAACGATTCCGAAATTACCGATGCGGTAAAATCCCTTGGAAGAAAACAAACAACAGATATGTTCATTGAC
CCACAGACTGGAATAAGGGATAACCAAATGCAGTCAGTTTTCAACACTAAACTAGTTACTACCATCAGGAGAGAAACTAGCTTCAAAAGGGCACATCTCA
CTTGGCCATCATCACCTTCACGAACTCCTCGTAGTTGATCTGGCCATCGCCATCCACGTCAGCTTCGCGGATCATCTCGTCAACCTCCTCGTCAGTCAGC
TTCTCGCCGAGGTTGGTCATGACGTGGCGAAGCGCGAATGGAGGAAGTGGAGAGAGGATGCCA