Detailed information on CNT30675148


BLAST search results

BLAST vs Swiss-Prot:
sp|P26320|PSBO_SOLTU, E-value = 5e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3010855Setaria viridisZea mays57.7631.1990.29175forward
CNT30342715Setaria viridisEragrostis tef61.3920.6991.94186forward
CNT30368766Setaria viridisSorghum bicolor57.7619.0492175forward
CNT30584070Setaria viridisEchinochloa crusgalli63.3716.392.19192forward
CNT30497590Setaria viridisDigitaria exilis57.119.6695.38173forward

Expression of CNT30675148

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MTSPVSGLLLVTLNVMLPVDDAAFLILVFWNSGGAFLAMPSALTVKDVGSRQNFFIW

>peptide 2 (99 aa)
HFPIHDGRLVRLELRVPDPLDLHILRCLGPKVGVRRLHTLEDTDDLASFRVALGDAQCDVARRRRSVLDLGLLELGRGVLGDALGLDGEGRRLQAELLHL

Sequence

>CNT30675148
ACACTTTCCCATCCATGACGGACGTCTAGTTAGACTCGAGCTGCGCGTACCAGATCCCCTGGATCTTCACATCCTTAGGTGCCTTGGCCCCAAGGTCGGT
GTCCGACGGCTGCACACTCTCGAAGACACCGATGACCTCGCCAGTTTCCGGGTTGCTCTTGGTGACGCTCAATGTGATGTTGCCCGTCGACGACGCAGCG
TTCTTGATCTTGGTCTTCTGGAACTCGGGCGGGGCGTTCTTGGCGATGCCCTCGGCCTTGACGGTGAAGGACGTCGGCTCCAGGCAGAACTTCTTCATCT
GGT