Detailed information on CNT30675139


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595608Setaria viridisOryza meridionalis52.4733.485.88170forward
CNT30557683Setaria viridisPanicum hallii26.5423.8290.786forward

Expression of CNT30675139

Peptides detected in this lncRNA

>peptide 1 (77 aa)
RDTCLRPNPDTCVVVDRARVKPISVGPDDVALLALVELAGAGVEVLLHRGLAHHEVAGAVAVAVPAGLATDLTSSEQ*

Sequence

>CNT30675139
ACGCGATACCTGCCTCCGGCCCAATCCAGATACGTGCGTCGTCGTCGATCGAGCCCGCGTGAAGCCGATCTCAGTCGGACCTGACGACGTAGCTCTCCTT
GCGCTCGTGGAACTCGCCGGTGCAGGTGTTGAAGTCCTCCTCCACCGTGGTCTCGCGCATCACGAAGTTGCCGGAGCCGTGGCCGTGGCCGTGCCGGCCG
GGCTCGCCACCGACCTCACCTCCTCCGAGCAGTAGTCAACCTCCTGGTAGTGAGCCATTGGTGATGATGCTTGGGTTACTTGTTCAGTGCCTGTATGCCT
TGAAGTGCTTGTGAATTGTGTGAG