Detailed information on CNT30674936


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30339202Setaria viridisEragrostis tef32.4230.5785.98107forward

Expression of CNT30674936

Peptides detected in this lncRNA

>peptide 1 (70 aa)
QQSLAFTIHILQTACAIYSKINECRLPKASFYLGANLALMASTSPLPIRKALARMSEDTGGVAPKSAAAT*

>peptide 2 (92 aa)
AAITSVHDTYPANGMRDLFKNQRMQTAKGFLLLGRELGLDGVDFPVADPEGLGQDVGGHRRRGAEERRGDVEVDPCHERGWSAPDDATSRDC*

Sequence

>CNT30674936
GCAGCAATCACTAGCGTTCACGATACATATCCTGCAAACGGCATGCGCGATTTATTCAAAAATCAACGAATGCAGACTGCCAAAGGCTTCCTTCTACTTG
GGCGCGAACTTGGCCTTGATGGCGTCGACTTCCCCGTTGCCGATCCGGAAGGCCTTGGCCAGGATGTCGGAGGACACCGGCGGCGTGGCGCCGAAGAGCG
CCGCGGCGACGTAGAGGTGGATCCTTGCCATGAGCGAGGTTGGTCGGCACCGGATGATGCTACCAGCAGGGATTGCTAACAGCAGGTGTCCGACGAGTGA
TGGAAATTAATGAACAGAGCAGGAGACCGT