Detailed information on CNT30674806


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690198Setaria viridisOryza sativa22.674.3886.3295forward
CNT30552096Setaria viridisOryza glaberrima25.5418.3883.18107forward
CNT30680010Setaria viridisTriticum urartu26.9730.5487.61113forward

Expression of CNT30674806

Peptides detected in this lncRNA

>peptide 1 (40 aa)
GPWGWHHLVSSPEHTTRALAIATQPPSTALRCASAELRPC*

>peptide 2 (34 aa)
AMGMASPRLIAGAHNPSARNRNPTTQHRAAVREC*

>peptide 3 (31 aa)
MFAWWICPMVDTSLMKSSPSPVEFSSILTATG

>peptide 4 (50 aa)
GHGDGITSSHRRSTQPERSQSQPNHPAPRCGARVLNCARAEAWRPITRRP*

>peptide 5 (35 aa)
MLLSRSASYSVPTESKIPGGEQCLHGGFVQWLILH*

Sequence

>CNT30674806
GGGCCATGGGGATGGCATCACCTCGTCTCATCGCCGGAGCACACAACCCGAGCGCTCGCAATCGCAACCCAACCACCCAGCACCGCGCTGCGGTGCGCGA
GTGCTGAACTGCGCCCGTGCTGAAGCTTGGCGGCCGATTACTCGTCGTCCCTAGTGTGCGCACCACCGCATGTTCGGATCCAAATGATGGAACGGGGCCA
CCCGTGACCCGTCCCCGCCGCCACCCTCCGCTCCGGTGAGGTACACCTGCGGCAAGTGATGTTGCTCTCCAGATCCGCCTCCTACTCGGTACCGACAGAG
AGCAAAATCCCAGGAGGCGAACAATGTTTGCATGGTGGATTTGTCCAATGGTTGATACTTCATTGATGAAATCTTCTCCGTCTCCTGTAGAGTTCTCTAG
CATCTTGACCGCTACTGGT