Detailed information on CNT30674795


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522718Setaria viridisSetaria italica60.3236.0998.5266forward
CNT30220729Setaria viridisHordeum vulgare32.6536.3690.28144forward
CNT30345524Setaria viridisEragrostis tef27.4440.7493.39121forward

Expression of CNT30674795

Peptides detected in this lncRNA

>peptide 1 (77 aa)
VHISLIRSRTCVQIHYWYNNLWSQGSFLHKYSYTFAVHTNTYVYGDPTSGRSLHLAVRVIHPCPSSLIHLPGTKLVA*

>peptide 2 (95 aa)
AYFIDPVQNMRTNTLLVQQPVVPGFLPSQILVHVCSTYEYIRLRRPHLRPVASPRRARHPPMPILAHSLAGDEVGGVGPGVVVDGVGESPAVSQP*

Sequence

>CNT30674795
GTGCATATTTCATTGATCCGGTCCAGAACATGCGTACAAATACACTACTGGTACAACAACCTGTGGTCCCAGGGTTCCTTCCTTCACAAATACTCGTACA
CGTTTGCAGTACATACGAATACATACGTCTACGGCGACCCCACCTCCGGCCGGTCGCTTCACCTCGCCGTGCGCGTCATCCACCCATGCCCATCCTCGCT
CATTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGAGCCCGGCGGTGTCCCAGCCGTAGTCACCGGGGA
ACTCGCCGGTCAGGTAGCTCGGGGGCTCGCCGGAGAGCGGGCCGAGGTGAGAGCCATGGTGGCGGCGGCCATCTCGATCAGATCACTCCTCTTGCTGTGA
TGCTCTGCTCTGTGTTTGTGTTCTGGTGTGATGGTTGTGTC