Detailed information on CNT30674625


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524662Setaria viridisSetaria italica92.9632.6398.86264reverse complement
CNT3020986Setaria viridisCitrullus lanatus29.589.0485.7184forward
CNT30384181Setaria viridisTriticum turgidum92.9640.4997.73264forward
CNT30552256Setaria viridisOryza glaberrima21.1323.1710060forward
CNT30437708Setaria viridisAegilops tauschii28.8726.2896.3482forward
CNT30239987Setaria viridisAvena sativa32.3914.9891.392forward
CNT3018293Setaria viridisZea mays92.9626.9999.24264forward
CNT3067537Setaria viridisLeersia perrieri50.748.8193.06144forward
CNT30688894Setaria viridisTriticum urartu92.9631.4798.86264forward
CNT30148543Setaria viridisBrachypodium distachyon54.238.2898.7154forward
CNT30116966Setaria viridisOryza nivara34.152.7196.9197reverse complement
CNT30602359Setaria viridisGaldieria sulphuraria78.5277.779.82223forward
CNT3039583Setaria viridisMarchantia polymorpha77.4654.3293.18220forward

Expression of CNT30674625

Peptides detected in this lncRNA

>peptide 1 (77 aa)
NLLNLLPFRSPLLRESLLLSFPLATKMFQFTRLSLACSWIQQAVQKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 2 (38 aa)
MLIFNSPKHFVACYALPRLWVPRYPPQAFPLLNLAINVI

Sequence

>CNT30674625
AAATCTATTAAACCTACTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCACCAGGTTG
TCTCTTGCCTGCTCATGGATTCAGCAGGCAGTTCAAAAGGTTGACCTATTTGGGAATCTTCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTC
GCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGCAAGCCTTTCCTCTTTTGAACCTCGCCATTAACGTGATT