Detailed information on CNT30674586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287995Setaria viridisTriticum aestivum22.6526.0590.9199forward
CNT30552083Setaria viridisOryza glaberrima23.815.8890.38104forward
CNT30658785Setaria viridisTriticum dicoccoides22.8828.3392100forward
CNT30580142Setaria viridisEchinochloa crusgalli26.3227.1995.65115forward

Expression of CNT30674586

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MASLFQIICGPKAVLSLIIIQASRRADQLS*

>peptide 2 (53 aa)
RNISFCLFEIIIHQDYINWIISHEYYGKSSFWTTLGLWLAYFRLFVVPKRFYL*

Sequence

>CNT30674586
GAGAAATATAAGCTTCTGTTTGTTTGAGATTATAATCCACCAAGATTATATAAATTGGATTATAAGTCATGAGTATTACGGTAAAAGTTCATTTTGGACC
ACTTTGGGACTATGGCTAGCTTATTTCAGATTATTTGTGGTCCCAAAGCGGTTCTATCTTTGATCATAATCCAGGCAAGCAGGCGCGCCGATCAGTTGTC
GTAGGTGCGGCACTCGTCGGTCTCCGGGTTCTCCTTGCAGTACTTCTCGAGCGGGTCGTTGTCCTCCTTGAGCTTGTCCCGGGCGTGGCTCGCCACCGTC
GACGCCATCTTTGCAGCTAGCTAGCTGTGTGTCGCGAAGTTTTTTCTGTGATTTGTTGTGGCTTTACTTGAAGAACTGTACGAGGCGTTGTTTTGGATGG
ATATGAGGTTTATTGTATATATAGCTTTGTTCGTCAC