Detailed information on CNT30674377


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523010Setaria viridisSetaria italica32.6426.0798.7379forward
CNT30682025Setaria viridisTriticum urartu31.8212.7587.0177forward

Expression of CNT30674377

Peptides detected in this lncRNA

>peptide 1 (54 aa)
PFNHPAFHHSKPLREKAPTCLLGKVIRIKSFYRISKQAGAQIQQNRLSLTRWGA*

>peptide 2 (28 aa)
MGGMRRESSMAAEAIGAGGDVWLGERWAA

Sequence

>CNT30674377
TCCTTTTAACCATCCAGCGTTTCACCATTCAAAGCCCCTCAGGGAGAAGGCACCAACTTGTCTTTTGGGGAAAGTAATTCGGATTAAATCTTTCTACAGA
ATCAGTAAACAAGCTGGGGCTCAAATTCAGCAAAATCGACTGAGCCTGACTCGATGGGGGGCATGAGGAGGGAGAGCTCCATGGCAGCGGAGGCCATTGG
TGCTGGCGGCGACGTGTGGCTCGGCGAGCGCTGGGCAGCGGG