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Detailed information on CNT30674368


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30388932Setaria viridisTriticum turgidum21.6614.8587.5128forward
CNT30454508Setaria viridisSaccharum spontaneum32.4926.1293.23192forward
CNT30342210Setaria viridisEragrostis tef32.4926.5691.67192forward

Expression of CNT30674368

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MISDTSAATRGILFRFFTRGISSDSPIAMIFWLISTILSSFLLNSGFSTSRTAGKILAVV

>peptide 2 (56 aa)
MQFTVTYMEMPHNKSLPSLMLPKSQYFTDKHKKMQVGSNDLRHQRSNKRNPLQVLH*

Sequence

>CNT30674368
ACATTGTAGAAGGTTGCTAAAAAGAAATATGTAAAAATTCACATGGTATAAGCCTCATAGCCAAATGCGTTACATAATTTTCTATTGTTACACAATCAGC
CAATCCTGCTTGGTACGTTTGTCACCCTTATAGTTCCAAATTCACATGTACGCGAATAGAAGCTGCAGCTAATTTCACCAAGATCATATGTGATACAATA
CAATGGACTTTAGCTAATGATCTGTATGCCATTGGCTTCATATCAGTACAGCTTCAGACGCTCCCTTCTGCCGGAAAACCGGAACGCTCACTTCTGATGC
AGTTCACTGTCACTTACATGGAGATGCCTCACAACAAAAGCTTGCCGAGCCTTATGTTGCCGAAGTCTCAATATTTTACAGACAAACACAAGAAGATGCA
GGTAGGCAGCAATGATCTCAGACACCAGCGCAGCAACAAGAGGAATCCTCTTCAGGTTCTTCACTAGGGGCATTTCATCAGATTCTCCGATAGCAATGAT
CTTCTGGTTGATCTCAACCATCCTGTCAAGCTTCCTCTTGAATTCAGGGTTCTCGACGTCCAGAACAGCAGGGAAGATCCTTGCTGTTGTG