Detailed information on CNT3067432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693746Leersia perrieriOryza sativa32.6335.7486.27233forward
CNT30553785Leersia perrieriOryza glaberrima37.3973.5588.01267forward
CNT30596221Leersia perrieriOryza meridionalis37.3952.3588.01267forward
CNT30109966Leersia perrieriOryza longistaminata37.3950.5789.14267forward
CNT30101607Leersia perrieriOryza rufipogon37.3933.3388.01267forward
CNT30576506Leersia perrieriOryza barthii37.3953.488.39267forward

Expression of CNT3067432

Peptides detected in this lncRNA

>peptide 1 (87 aa)
TEAKPKMSSRGTSSFCNKANFTRIAVVTLLLLTLGILSFTPPSHIESSNTTRKSRYILISGCNNYCSVACCYCNIHRFPPVCEKCCK*

>peptide 2 (32 aa)
MFLLKTCKGVTYSLSILLVERQSRPPIILFME*

Sequence

>CNT3067432
ACTGAAGCTAAACCGAAGATGTCTAGTAGAGGTACTAGCAGCTTCTGTAACAAGGCCAACTTCACGAGGATAGCCGTTGTAACTTTGCTTCTACTAACCC
TGGGGATTCTTTCCTTTACACCACCTTCACACATTGAAAGTTCAAACACCACTCGAAAATCACGGTACATTCTTATAAGTGGTTGCAACAACTACTGCAG
CGTGGCATGCTGCTACTGCAACATTCACAGGTTCCCTCCAGTTTGTGAGAAGTGCTGCAAATAACATTTCTAGGAAGGTGCTCAGGCAATTTTGTCCTGT
GCAATCTCACCGTCATTTTGTTATTATCATTTATCTGTTCCTAGTTGGTTCTCTTCGCTGTGTTGAATCAACAATATAAACCTGGCAGTATCAGATTTAC
CATGGTGTTTCCTTTGAATCAGTGTTATTTCAAACTCCGGTATAAGATAGGATACCAAAAGCTACAAAAGCAAGTAAGAATGTAATAGCATAACTTGTAA
ATAGTTATTTTTAACGTGCATTTTGTCCAACTGATTTGAAAAACAGTAGGCAAAACAGTTCTTACAAGCATCCTAACAGTACAACTTAGGAAACACCTAT
AATTGCAAATGTTTCTCTTGAAAACATGCAAAGGCGTAACCTATTCTCTTTCTATCCTATTGGTAGAACGCCAAAGTAGGCCTCCGATAATATTGTTTAT
GGAGTGAGAAGCCA