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Detailed information on CNT30674307


BLAST search results

BLAST vs Swiss-Prot:
sp|Q37619|NDUS2_PROWI, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548493Setaria viridisIpomoea triloba6.6833.7194.49272reverse complement
CNT30499644Setaria viridisCoffea canephora3.7121.6686.75151reverse complement
CNT30619472Setaria viridisSesamum indicum6.6842.592.65272reverse complement
CNT30405732Setaria viridisBeta vulgaris12.0939.7488.82492forward
CNT30201970Setaria viridisPisum sativum12.0431.894.49490reverse complement
CNT30491147Setaria viridisOlea europaea2.2423.6490.1191reverse complement
CNT30164425Setaria viridisPistacia vera11.8425.9792.74482reverse complement
CNT30297416Setaria viridisTriticum aestivum15.0644.3998.04613forward
CNT30554303Setaria viridisOryza glaberrima5.1395.8797.13209forward
CNT3079268Setaria viridisBrassica juncea6.5698.5296.63267forward
CNT30232833Setaria viridisAnanas comosus10.2765.3198.33418forward
CNT30717224Setaria viridisMalus domestica golden3.2222.0297.71131forward
CNT30479086Setaria viridisArabidopsis halleri2.4822.892.08101forward
CNT30481303Setaria viridisChara braunii9.9567.3981.23405forward
CNT30574471Setaria viridisVitis vinifera5.4370.8390.05221forward
CNT3038653Setaria viridisCucumis melo24.51100.592.79998forward
CNT30104344Setaria viridisOryza rufipogon28.7272.3898.891169forward
CNT30333539Setaria viridisCynara cardunculus2.1423.7791.9587reverse complement
CNT30726873Setaria viridisLupinus angustifolius5.673.0891.67228forward

Expression of CNT30674307

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MRTSFPFALPTLRSHGYQSGGRVGSRYHEPSVPHIYQEASVVHRFHRMLLSLGKDRVSVQLCFGCFAME*

>peptide 2 (60 aa)
MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRCGKAPPCCASSQLRRVSLVILIKPQP*

>peptide 3 (78 aa)
MLRMLRHGIDRLSSPSFPVHSLYISDTQGRTRWEESSPSLCPVDHSAGILHSRLRLTAARECSCRYVSLSGSLAPPLIS

>peptide 4 (73 aa)
MGRPTTSLFHFHLGPGQVSGGPCRAPSPPKQTVRGSFPSYGSNHSQMPREASFLMIWWFSKRAPAATARNYDQ*

>peptide 5 (48 aa)
MVEEFLSQRVRDACGVRTFRTTTGRSWADPAPKHKGGIGGKGPGLSYK*

>peptide 6 (38 aa)
MLCHSTRSYETGMHPGSRDSFIEFQQFLPLLKSPKERS*

>peptide 7 (57 aa)
MSVFLGHRRNIDRVNDGTNNETLRQLFRTRSLASHTQVLSEPCNKVTHNTALPLELP*

>peptide 8 (50 aa)
TFRNDSIEDIYIHRNAYSGLRSGKSSLLDRKGGHSRLGGRHSRLSTPPSL*

>peptide 9 (33 aa)
MSGAPSLGGAFVEPNRRKSKRARPHPASNRRGA*

>peptide 10 (30 aa)
MNIVRCCSSRIPAYPRLGWVGPPLHFFTFT*

>peptide 11 (30 aa)
MRFRRAQRPEANPFTVRRTNTIRRLMARPA*

>peptide 12 (84 aa)
GHFEMTASKISIYTGTLIPDCVPEKVAYLTERAGTLGSEVGTLVFQPHRHFEFSGALFTYSLYELQVNGAGACERKGSSSHFNP*

>peptide 13 (79 aa)
MSSFPTGRRFPFPRINEEGRSQLILPKNRKRSAMPGRGDGKRNCSEERYWGSQCFSTPNEMRQPRDALLLTPRRFRDGA*

Sequence

>CNT30674307
GGACATTTCGAAATGACAGCATCGAAGATATCTATATACACAGGAACGCTTATTCCGGACTGCGTTCCGGAAAAAGTAGCCTACTTGACAGAAAGGGCGG
GCACTCTCGGCTCGGAGGTAGGCACTCTCGTCTTTCAACCCCACCGTCACTTTGAATTTAGTGGGGCACTGTTTACTTACAGCCTCTACGAGTTGCAAGT
GAATGGGGCCGGTGCGTGTGAACGGAAGGGTTCATCAAGCCATTTTAACCCCTAAACAAAATAGGAAGAGGGGTACTTGACTAATAGGGGGCAATTGCAT
CGCACCTGACTGTGAGGGACCTCTTGATACCTTATGTTCACTTCCTAACTAGTAGCCGGTTTCCTGTCGCGGAAGCCTTTTCCCAGTGCGCGGAGCCCCA
ACGAGGAAGGTGTTAGTGCTTTCTCATGGGGTCAATAATGCTAATCCCTCTTTTTGTGCCGGGAAGAAGATAAGAAAAGGCGAAGCCTTCTCTTGGTTTC
CCAACCTGTTGCTTCTAAAGGCTGCCCTCTCTCGGCTGGATTTTGGTCCAGCCTACTACGAGGATCCCGTATCCCGTACATCGTCTTTCTCCCTCCTGGG
TTCCCGTGGTTCCTATGCCGCCGCGTTTCCCGGTCCTTTTCTTTTAGTGCTTCGACCCGAAGCGATAGCTTGACGCGTTTTCCGTGGATAAGATGGCTGC
GCTCCAGCTCACTAAAGAATGGGACGGCAGTGGTCCGCCGGCAAGCTCGTTCTGATCTTGGACGCAGTACATTGGAATCCTGAAGCACCACCACGAACGC
TACCGCGCGTGCGCCTGCGGTGCGGTAAGGCACCACCCTGTTGTGCCAGCAGCCAACTCCGGCGTGTCAGCTTAGTTATCCTCATCAAGCCACAACCTTG
ATGTCTAGCTTCCCAACTGGTAGACGGTTCCCTTTCCCCCGGATCAATGAAGAAGGGAGAAGTCAGTTGATTCTTCCGAAGAACCGGAAGCGAAGCGCTA
TGCCGGGGCGAGGGGACGGGAAAAGAAACTGCTCCGAAGAAAGATATTGGGGTTCCCAATGCTTCTCCACGCCCAACGAGATGCGCCAACCTCGGGATGC
TTTACTCCTAACCCCACGACGGTTCCGAGACGGAGCTTAACCTGAGTCTCGGTTAAGAACGGCGATGATCTACGTTTCACACGGCGCACGATTCCATGGA
TAGTTTCATTCGAGATCGTGATGGAGGACATAGCTTACGATCATCGGCTTTGATCATGCCACTAGGCATTTGATTAGGACATTGCACAATGATCCGAACA
CTTTGTCGCATCTCTTCGATACGAATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAAGATCCGATTGGTCATGAACATCGTAAG
GTGCTGCTCTTCGCGAATCCCAGCATACCCCAGGTTGGGATGGGTAGGCCCACCACTTCACTTTTTCACTTTCACTTAGGCCCGGGCCAAGTCAGTGGGG
GACCCTGTCGGGCTCCTTCCCCCCCAAAACAAACTGTACGTGGGAGTTTCCCTTCATACGGCTCGAATCATTCTCAGATGCCCCGAGAGGCATCTTTCCT
TATGATCTGGTGGTTCAGCAAACGAGCACCGGCCGCAACAGCAAGGAACTATGACCAATAGAGTCAGACACAGAGCGTCATACTTCTTTATCTTGTGATG
GTTGAGGAGTTTCTTTCTCAGAGGGTGCGGGACGCTTGCGGAGTCCGTACCTTCCGTACCACCACAGGTCGTTCTTGGGCAGATCCCGCTCCTAAACATA
AGGGAGGGATAGGGGGAAAGGGGCCGGGCCTATCATATAAATAGGGTTGTAGAAAGACCACGTATTTTCATTCGACGTTCCGGGGCGCCCGATTCGATCA
ACGAATTTGGCGAGCTGATCTGCTTTGATCCAGGAGAAAGCCCAGTCAGCCACCTTTTCGGTGCAGGTCACGTGACCTACAGCTCGGCCTTCGCTTTTTG
AGACTTCCTCTACCCACATCTCTATGTGCCCGCAGCACTTTCATATGGAGAAAGATGGGCTTACCATGTTCCATCAATAGCACCTAACCTATGCCGATTT
TGGCGGACCGTGCTCCACCCCGGTGAACTCATGCGGTTCCGACGTGCCCAGAGGCCAGAGGCGAATCCGTTCACGGTCCGTAGGACCAACACCATTCGAA
GGTTGATGGCCCGCCCCGCCTAGAATAGGAATCTTTGACTGGGCTTACACACATTCGCTCACTTACGCTGTCCCCCCTCAGCTCACCCTAGCCCCGGGTA
CGTCGTCTCCAAGGCTTCACACAAAATCTTCACTGACAACATATGCATGCTTTTGTAGGGTCGGGCAGAACCGTTGTTGCCTGATGGGAACTTCCCCCAT
ATTGCTATCAATGTCTTCATGTCGCACGACCTCTTAACATTACACCACTGAATTCCCAATCCTTTGCTTGCTGTGCAGTGACAGTACCAATATCCACTAA
TCGTTGTTTCCAGATACGGTTGCCGGTTGACATCTCTTCTAATTCGTCGATACGAGAAGCAAATTGTTGTGTGGAGGAATCAATATCTCGACATAAGCCA
AGAGGCAGATGTTGTGCCACTCCACCAGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGGGACTCTTTCATAGAATTCCAACAATTTCTCCCGCTCCT
CAAAAGCCCAAAGGAACGGAGTTGATGCTCCCACATCCATAGCATGAGTAGTTGAAGCAAGTGAATGATTTGAAATTCGAGTTATTTCACAGAATAACAC
TCGTATATATTGAGCTCGTAATGGTACCTCACAATTCAAAAGTCTCTCTACGGCTGAAGAATGAGCGTGTTCTTGGGCCATCGTAGAAACATAGATAGGG
TCAACGACGGAACGAACAACGAAACTTTACGACAGCTTTTTCGTACACGTTCACTTGCATCACATACACAAGTGCTCTCTGAACCGTGCAATAAGGTCAC
CCATAACACGGCTCTCCCACTGGAGTTACCTTAGCCCCGGGCCATGCTATTCCATGATATTGGAAAAATGGCAGCCTAACTACTTATTATCATCGTCTTG
AAAGCTGGGCGCCTTTTGAATATGAGTGGGGCTCCTAGTCTAGGCGGCGCCTTCGTGGAGCCAAACCGAAGGAAGAGCAAAAGGGCGAGGCCACACCCGG
CTTCGAATAGGAGGGGGGCTTAGCTCTGGATCCCGCCTGCTTGCAGAAATGAATGGATCAGAAAGGGGGCTGGGTTCTATTTCCGGGCCGGGCAGGAGGT
GAAGGCCAGAAGAAGAAGAGAAGTGCGCCTTCCCGGTAAGGAAGAGGATAAAAAGGTGCTGTCATCTATCTCGACCTGTTTCCCGAGGCGTTGGAAATGA
AGACCGGCTCAGAGAATCACTGGCGTGCTTTCTCTCCCCCATCGTTTCGCCAACAAAGAAGTCATCCTTGACTTGACGATTGACCATTCCATCCCTACCG
AGCCGCCTCTTCGAAGTATTTACCTCTGCCTTTATTTTTTTCTCAAATAAAAAAGAAAAATTCAAGAACCTCGTCTGTGATTTAATCGGCCCTAAGGGAG
TTTACTCGACCCATTCTCCAGTCTCCCGCACTGCTCAAGTGTGCGACTCCGTATGAGGACCTCCTTCCCTTTTGCTCTGCCCACTCTCCGTTCACACGGT
TATCAAAGCGGAGGAAGGGTGGGCAGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCAAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCC
TATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATGGAATAGATCGACTCAGTTCCCCTTCTTTTCCGGTGCACTCGCTT
TATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGGTCGATCATTCCGCTGGCATCTTGCATTCACGCCTCCGTT
TGACTGCCGCTCGGGAATGTAGTTGTAGATACGTGAGTCTTAGTGGGTCGTTGGCTCCACCTCTTATCTCC